PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023891920.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YB
Protein Properties Length: 200aa    MW: 22746.4 Da    PI: 5.4306
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023891920.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB1437e-4559151297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     +eqdr+lPianv+ imk++lP nakis   ket+qecv efi fvt+eas+kc++ek +t+ngdd++walatlGf+dy+epl+ yl++yrelege
  XP_023891920.1  59 KEQDRLLPIANVGWIMKQMLPPNAKIS---KETMQECVFEFIRFVTGEASNKCHKEKCNTVNGDDICWALATLGFDDYAEPLRRYLQRYRELEGE 150
                     89************************7...689************************************************************99 PP

           NF-YB  97 k 97 
                     +
  XP_023891920.1 151 R 151
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MPNNKLTNIN AQTKDKSPDD QNPFFIEIVD NMGNNLEREG FKYHFAGAST SSGEDGVIKE  60
QDRLLPIANV GWIMKQMLPP NAKISKETMQ ECVFEFIRFV TGEASNKCHK EKCNTVNGDD  120
ICWALATLGF DDYAEPLRRY LQRYRELEGE RAQQSKGSNN EEKNETSDYG VETPRKAAVP  180
TTPLKFNVID RSNSSLPRRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.13e-42NF-YB family protein