PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023891930.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YB
Protein Properties Length: 176aa    MW: 19908.2 Da    PI: 6.7849
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023891930.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB175.55.4e-5532127297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     +eqdr+lPianv+rimk++lP nakisk+aket+qecvsefisfvt+easdkc++ekrkt+ngdd++walatlGf+dy+epl+ yl++yrelege
  XP_023891930.1  32 KEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALATLGFDDYAEPLRRYLQRYRELEGE 126
                     89*******************************************************************************************99 PP

           NF-YB  97 k 97 
                     +
  XP_023891930.1 127 R 127
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MVDNMGNNSE REGFKYHFAG ASTSSGEDGV IKEQDRLLPI ANVGRIMKQI LPPNAKISKE  60
AKETMQECVS EFISFVTGEA SDKCHKEKRK TVNGDDICWA LATLGFDDYA EPLRRYLQRY  120
RELEGERAHQ NKGSNNEEKN ETSDYGVETP RKAAVPTTPL KFNVIDRSNN SLSRRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.12e-53NF-YB family protein