PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023892019.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 200aa    MW: 23319.4 Da    PI: 9.427
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023892019.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR157.54.5e-1846123290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     fYn+YAk+ GF +r+ +s+ks+r+++i++r + C     +++++ +           r  C+a++ +k+ek+g+w+v k++ +HnH+l+
  XP_023892019.1  46 FYNKYAKQEGFLTRVLSSRKSERDRSIISRGLGCRGGSVNRKQDGQ-----------REVCTAMILLKREKSGRWVVRKFVRDHNHPLV 123
                     **********************************877777666555...........999***************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MDMEVDDGNG RLETSAAGEQ STCDVDTNQE PYVGMDFESE EAARAFYNKY AKQEGFLTRV  60
LSSRKSERDR SIISRGLGCR GGSVNRKQDG QREVCTAMIL LKREKSGRWV VRKFVRDHNH  120
PLVVQLQKSR QIIDEKDRKI QELTAELRVK KRLSSAYREQ LLKLMKDVED HNEHLRTKVE  180
LVFDNLREFE AKRKEVSDRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.12e-54FAR1 family protein