PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023892154.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 893aa MW: 102976 Da PI: 7.8419

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023892154.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	81.9	1.1e-25	96	204	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..................tekerrtraetrtgCkaklkvkkekdgkwe 77 +fY+eYAk+vGF v++++s++s+ +g++++++f C+++g+++e+k + +++ r + + ++t+Cka+++vk ++dg w XP_023892154.1 96 SFYREYAKSVGFAVVIKASRRSRISGKFIDAKFACTRYGSKRERKADetmepdsniestmnipvkRRRGRINLSWSKTDCKACMHVKTRQDGLWI 190 5*****************************************9999**********8877777779999**************** PP FAR1 78 vtkleleHnHelap 91 ++++ ++HnHe++p XP_023892154.1 191 ISSFIKDHNHEIFP 204 *********975 PP

Sequence ? help Back to Top
Protein Sequence Length: 893 aa Download sequence
MGIDLEQPSG ECHKEDSRSS VNVNMVHGGD GVHDRDRLII KSPNVADKEN TGPNVNSRIS 60 DSRNKGNAVE DINLNSFKSL EPHDGMEFES KEEAFSFYRE YAKSVGFAVV IKASRRSRIS 120 GKFIDAKFAC TRYGSKRERK ADETMEPDSN IESTMNIPVK RRRGRINLSW SKTDCKACMH 180 VKTRQDGLWI ISSFIKDHNH EIFPDQAYYF RGHRNLDLGS SNVDALHAIR ARTKKMFATM 240 SRQSGGYKKV DKQKGGIANQ LDSGKHLALE EGDAQVMLDH FMYMQDENPN FFYAIDLNEE 300 QRLRNVFWVD AKGRLDYGSF GDVIFFDTTH IKNEYKLPFA PFIGVNHHFH FLLLGCALLS 360 EETKPTYVWL MRAWLRAMGG RAPSVILTDQ DKALKEAIAE VFPDSRHCFC LWHILSKIPE 420 KLSYVIRQHE NFMAKFNKCI FKSWTNEQFE RRWWKMVDRF NLRNDLWFQS LYEEREQWVP 480 TYMKDVFLAG MSTIQRLEGM NCLFDKYMQR KTTLKEFLEH YKVILREKCE EEAKADFETW 540 HKQPGLKSPS PFGKQLATLY THAIFKKFQN EVLGVVACHP RKESEDGSTI TFRVQDFEEN 600 QDFIVVWNET TSDIACLCHL FEFNGFLCRH VMIVLQMSGV HSIPSQYILK RWTKDAKSRQ 660 TTREGSVVES RVQRYNDLCR RAFKLGDEGS LSQETYNIAL NALEEALRKC ESVNNSIQSL 720 IEPSLPSTHG PQGLEEVNQV NSTSNTNRKN SASKKRQVQP EPEVLSIGTH DSWPQMGHAN 780 LRAPALDCSY ESQERMQGME QLQSRAAALD GYFSTQQLVQ GMGQLNSIAP IHDVHYLARQ 840 RLHEMGQLHF RPQTIPSCFD VQDSLQDMDQ SNMGPSQLHG MASKHIHQKH LSR

Sequence ? help Back to Top

Protein Sequence Length: 893 aa Download sequence

MGIDLEQPSG ECHKEDSRSS VNVNMVHGGD GVHDRDRLII KSPNVADKEN TGPNVNSRIS  60
DSRNKGNAVE DINLNSFKSL EPHDGMEFES KEEAFSFYRE YAKSVGFAVV IKASRRSRIS  120
GKFIDAKFAC TRYGSKRERK ADETMEPDSN IESTMNIPVK RRRGRINLSW SKTDCKACMH  180
VKTRQDGLWI ISSFIKDHNH EIFPDQAYYF RGHRNLDLGS SNVDALHAIR ARTKKMFATM  240
SRQSGGYKKV DKQKGGIANQ LDSGKHLALE EGDAQVMLDH FMYMQDENPN FFYAIDLNEE  300
QRLRNVFWVD AKGRLDYGSF GDVIFFDTTH IKNEYKLPFA PFIGVNHHFH FLLLGCALLS  360
EETKPTYVWL MRAWLRAMGG RAPSVILTDQ DKALKEAIAE VFPDSRHCFC LWHILSKIPE  420
KLSYVIRQHE NFMAKFNKCI FKSWTNEQFE RRWWKMVDRF NLRNDLWFQS LYEEREQWVP  480
TYMKDVFLAG MSTIQRLEGM NCLFDKYMQR KTTLKEFLEH YKVILREKCE EEAKADFETW  540
HKQPGLKSPS PFGKQLATLY THAIFKKFQN EVLGVVACHP RKESEDGSTI TFRVQDFEEN  600
QDFIVVWNET TSDIACLCHL FEFNGFLCRH VMIVLQMSGV HSIPSQYILK RWTKDAKSRQ  660
TTREGSVVES RVQRYNDLCR RAFKLGDEGS LSQETYNIAL NALEEALRKC ESVNNSIQSL  720
IEPSLPSTHG PQGLEEVNQV NSTSNTNRKN SASKKRQVQP EPEVLSIGTH DSWPQMGHAN  780
LRAPALDCSY ESQERMQGME QLQSRAAALD GYFSTQQLVQ GMGQLNSIAP IHDVHYLARQ  840
RLHEMGQLHF RPQTIPSCFD VQDSLQDMDQ SNMGPSQLHG MASKHIHQKH LSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein