PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023892190.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 247aa    MW: 28723.9 Da    PI: 5.732
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023892190.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR188.78.4e-2874165191
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     +fY+ Y++++GF++r++++++s ++++i+ r+fvCskeg+r ++ ++ +++r   +r+ tr gC+a++++  ++ gkw v+ +++eHnHel+p
  XP_023892190.1  74 EFYEMYGRRMGFTIRNNRTRRSLKDNSIIGREFVCSKEGFRLKKYEN-REKRAlpSRPATREGCNAMMRIAAKDGGKWAVYGFVQEHNHELNP 165
                     6*****************************************99998.33333459**********************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MASPSGHGYK SNRNYRQWLT ETFDGHETAD DELSDNLDGN DNIIQPSLQA FSLTSEPLEP  60
FIGMEFESAE DAREFYEMYG RRMGFTIRNN RTRRSLKDNS IIGREFVCSK EGFRLKKYEN  120
REKRALPSRP ATREGCNAMM RIAAKDGGKW AVYGFVQEHN HELNPSKIPP QRSHRLAFSE  180
DEKDLKIREL TTELHREKKK SAAYQQQLQL VLKYVEEYTQ RLSLKVEVVE NNMTELESEE  240
QDSAQSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.11e-40FAR1 family protein