PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023892201.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 256aa    MW: 29783.6 Da    PI: 6.2504
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023892201.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR185.58.4e-2779169190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     +fY +Y++++GF+vr++++++s++n++++ ++fvCskeg+r+++   ++++    + ++tr gC+a++++ +++  kw+vtk+++eHnH+l+
  XP_023892201.1  79 EFYVTYGRRTGFTVRIHHNRRSRMNNQVIGQDFVCSKEGFRAKKYVYRKDR-VlpPPPVTREGCQAMIRLALRDGVKWVVTKFVKEHNHKLM 169
                     6******************************************99883333.234899********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MMDNEPHQGF DLDDSDLDLQ AETYEKHIRI EDGLPNNLNM CVGEDDRVSD QSVGDLPMNA  60
EALEPYIGME FNSRDEAREF YVTYGRRTGF TVRIHHNRRS RMNNQVIGQD FVCSKEGFRA  120
KKYVYRKDRV LPPPPVTREG CQAMIRLALR DGVKWVVTKF VKEHNHKLMS PSKVPWRGSG  180
KHLVSEDEKD KRIRELSLEL YNEKQKCKRR CAAYEDQLNM ILKDLEQHTE HISKKVADIV  240
QSIKDIEEEQ SEADSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.14e-43FAR1 family protein