PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023892261.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 213aa    MW: 24711.7 Da    PI: 7.9838
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023892261.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR189.54.5e-2848136290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     fY+eYAk++GF +r+ +s+ks+r+g+i++r++ C+keg++ +++++ + + r+r+++r gC a++ vk+ek g+w+vtk++ +HnH+l+
  XP_023892261.1  48 FYDEYAKRLGFLTRIVSSRKSERDGSIISRRLACNKEGFNVNSQRRGQVRIRKRESKREGCMAMFLVKREKPGRWVVTKFVRDHNHPLV 136
                     9*********************************************99999************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MDTEPLAEDK NVIADSSIGS ESGIYEVDAN QEPYEGMLFE SEEAAKAFYD EYAKRLGFLT  60
RIVSSRKSER DGSIISRRLA CNKEGFNVNS QRRGQVRIRK RESKREGCMA MFLVKREKPG  120
RWVVTKFVRD HNHPLVISSE KGRPTPDEKD RRIRELSSEL HRANQHLASC REQLRTFMTY  180
VEEHTECLSR TVEGVVHRIR EVESEDQKPS QYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.16e-59FAR1 family protein