PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023892276.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 155aa MW: 17737 Da PI: 9.6551

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023892276.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	90.7	2e-28	48	136	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+eYAk++GF +r+ +s+ks+r+g+i++r++ C+keg++ +++++ + + r+r+++r gC a++ vk+ek g+w+vtk++ +HnH+l+ XP_023892276.1 48 FYDEYAKRLGFLTRIVSSRKSERDGSIISRRLACNKEGFNVNSQRRGQVRIRKRESKREGCMAMFLVKREKPGRWVVTKFVRDHNHPLV 136 9*******************************************99999**********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 155 aa Download sequence
MDTEPLAEDK NVIADSSIGS ESGIYEVDAN QEPYEGMLFE SEEAAKAFYD EYAKRLGFLT 60 RIVSSRKSER DGSIISRRLA CNKEGFNVNS QRRGQVRIRK RESKREGCMA MFLVKREKPG 120 RWVVTKFVRD HNHPLVISSE KGRPTPDTYK KNVTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	2e-43	FAR1 family protein