PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023892537.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GRAS
Protein Properties Length: 259aa    MW: 28625.5 Da    PI: 7.7873
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023892537.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS35.71.2e-11167235269
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppset 69 
                     ++lL  cAea+ ++d++++q+lL  l+el+  +gd+++Rla + +eAL +++++ +s+ ++   ++s+ 
  XP_023892537.1 167 EQLLNPCAEAIVKNDMSRVQHLLYVLKELRDAKGDANHRLAWHGLEALTKHIFSFSSSAASPSsSTSSI 235
                     689***************************************************444433332122222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MTIGEPEPNH PTSDQIMDWL NTGTIFPAFM DDSYNSGWWD ESQNISQDLI DTNSTLTYLT  60
NDTANITTST QSDYPTITNH PSPSDSSKKR KTASDPLPKP SSNHHRKNHS RRISLQAEGG  120
DAAAAVDQKV VTVKKSVGNK RSSWKSTGNN CHNGNNNNNK KEGRWAEQLL NPCAEAIVKN  180
DMSRVQHLLY VLKELRDAKG DANHRLAWHG LEALTKHIFS FSSSAASPSS STSSIDPKVL  240
TSASTDSRIF QQSLLKFNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13840.14e-26GRAS family protein