PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023892765.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 237aa MW: 27708.2 Da PI: 9.3491

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023892765.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	63	6e-20	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll ++v ++G g+W+++ar g++R++k+c++rw +yl XP_023892765.1 16 KGPWTPEEDKLLSEYVSLHGEGRWSSVARSAGLNRSGKSCRLRWVNYL 63 79********************************************97 PP
2	Myb_DNA-binding	51.5	2.3e-16	69	113	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T++E+ +++++++ +G++ W+tIar+++ gRt++++k++w+++ XP_023892765.1 69 RGQLTPQEEGIIIELHAIWGNK-WSTIARYLP-GRTDNEIKNYWRTH 113 7888****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MATMIGWGMQ EQGWRKGPWT PEEDKLLSEY VSLHGEGRWS SVARSAGLNR SGKSCRLRWV 60 NYLRPGLKRG QLTPQEEGII IELHAIWGNK WSTIARYLPG RTDNEIKNYW RTHFKKKEKS 120 SQKQEKRKQE ILKQKQQQQL QLQLQQQQQV QRPQEHDIKT VFSQAETSTE EMTSETHGIR 180 QQMVLKNPNS EDQCTPKMYQ DFASWFDTVG DDGLSSGLWN FADDYTVAWM RQVCATN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30210.1	4e-64	MYB family protein