PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023892770.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 251aa    MW: 28325.9 Da    PI: 8.0661
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023892770.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.22.9e-0578100123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C+k Fs++  L  H++ H
  XP_023892770.1  78 FPCKYCSKKFSNSQALGGHQNAH 100
                     89******************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MSERISCSNV DGQGKAEVEL PMEVELDQLL DLRLSNSVVD GHASKVANNL LDGFDKKSPK  60
SLEGPEPFNE VKEKKQYFPC KYCSKKFSNS QALGGHQNAH KHERAFLKRM ASLDCHLNRY  120
YSPMPTLPHL HHESLNRALG VHMRSMIHKP FHSRPHAGVW YGKEVWSKPQ YGVHHLSMDD  180
YWVAGGGFQP RDMMGVNLRD AIDDFEHSSL ISNSTGSVAN NRIASLWDFQ GNSFSRNQQL  240
KAPGLDLSLN L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.13e-16C2H2 family protein