PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023892818.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 249aa    MW: 28608.5 Da    PI: 5.1215
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023892818.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR182.95.3e-2681171190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     +fY +YAk++GF++r+++ ++s +n  i+ r+fvCs+eg+r+ +++  +++   +r+ tr gCka++++  ++  +w+vtk++ eHnH+l+
  XP_023892818.1  81 DFYYDYAKRMGFTIRTNRIRHSLKNMAIIGRDFVCSREGFRAAKHTLrNDRVLPPRPITREGCKAMIRLAARDGRTWVVTKFVREHNHKLM 171
                     6*****************************************9988723444459**********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MAGIAGIHEF LDGDGGFDDE IVENSGECDE ATEDGLLQHC NLNNVVNDHL GMIERSEEGL  60
SAEILEPCIG MTFSSLDGAR DFYYDYAKRM GFTIRTNRIR HSLKNMAIIG RDFVCSREGF  120
RAAKHTLRND RVLPPRPITR EGCKAMIRLA ARDGRTWVVT KFVREHNHKL MTHCNFPGEL  180
PIVNILSEEE KDKKIKDLYD ELQYERERTA TFRQQLCVIL KDLEEHAQFM TLRVEDIVNS  240
MKEIELSDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.11e-41FAR1 family protein