PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023892883.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 119aa    MW: 13457.4 Da    PI: 7.58
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023892883.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.62.9e-081053344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                      W++eE +++ +++k+ + +    +++Iar ++  ++  ++k+++
   XP_023892883.1 10 VWSPEENKKFEELIKEIPLDcphIFEKIARALP-SKSILDIKEHY 53
                     7********************************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    
MNHKSPPRAV WSPEENKKFE ELIKEIPLDC PHIFEKIARA LPSKSILDIK EHYGSLIEGI  60
FIGHRPSFIE VPNCGNSEVG EIVEEIPNKK KKGKELAPAV EGKTQEEKRN GGSMDQRRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05790.11e-07MYB family protein