PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023893201.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 252aa    MW: 27439.8 Da    PI: 7.2542
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023893201.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.0004699121123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_023893201.1  99 FSCNYCRRKFFSSQALGGHQNAH 121
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MHYSNMVKPN SNLESENESE VSSQVASNVP VQEASLDLSK DSTTNSSCLT NAIKPQADPK  60
PVSLDLTLHF STIDANMKAT DETGEAAAHN SAATVPRVFS CNYCRRKFFS SQALGGHQNA  120
HKRERTMAKR AMRMGMFSDR YTSLASLPLH GSAFRSLGIE AHAAMHQRIL PSERPPRGGA  180
RFEQGYFGVP MFVEDDDVGL FWPGSFRQVS EPVGAVGGNL AMELAQNSNM NFVMTAPPPR  240
TTSSSPDLTL KL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.11e-46C2H2 family protein