PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023893372.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YC
Protein Properties Length: 120aa    MW: 13710.6 Da    PI: 4.0525
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023893372.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC703.9e-2216338100
           NF-YC  38 misaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprde 100
                     m+sa++P+++skacel ilelt+r+wl++e+ +r+t++  dia av   d  dflvd+ p d+
  XP_023893372.1   1 MVSADTPIVFSKACELSILELTVRAWLQTEKYRRQTIQPFDIAWAVRLDDHLDFLVDVAPLDQ 63 
                     89********************************************************99885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
MVSADTPIVF SKACELSILE LTVRAWLQTE KYRRQTIQPF DIAWAVRLDD HLDFLVDVAP  60
LDQEHYSKEE GSEKESEQTE SLTAESLNLP MMTNVGELFM TNPELSGPYM FAVCTINVMY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.14e-20NF-YC family protein