PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023893375.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 221aa    MW: 25251.7 Da    PI: 4.9365
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023893375.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.81.1e-09164208655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++ r RR++i ++ +eL +l+P +      K++ ae+L+ A +Y+k+Lq
  XP_023893375.1 164 SIAARERRRKITEKTQELGRLIPGC-----SKMNTAEMLQAASKYVKYLQ 208
                     67889*******************9.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MALSTYTELG TLQHLNTQIS FQQRQAELAG ELLSYSNNFE LQNTLLHPLY DQESFLHPEE  60
CYTHLLPYLS SSCEPFISLS EMLTPPQDFE PCSIPKRQRC HENQFSLDFT PTFFDGLVPN  120
PCMVAEVLPE LFSQLPEYGI PQVDCTQNVE SSKKMNERSV SAQSIAARER RRKITEKTQE  180
LGRLIPGCSK MNTAEMLQAA SKYVKYLQAQ VRILELMGSF Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.12e-21bHLH family protein