PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023893406.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 358aa    MW: 40552.7 Da    PI: 6.3591
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023893406.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.44.5e-12182228455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      h ++ErrRR+++ ++f  L  ++P +     kK++Ka++L +A++Y+k+Lq
  XP_023893406.1 182 DHIIAERRRREKLGERFIALSAIVPGL-----KKMDKASVLAEAINYVKELQ 228
                     699************************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MEISSVKWLS DLGMDEYNYI HQSHMNTLDG FTTHDMATAM VENFQQSLSS ESYSSYPTFT  60
EKATTTLSNT SAETYQRPAK QPKTNSWDSC ITDHVSPKPS SSSHILSFEN SISMRTNPQE  120
FYGSHDSSLK LNNEMVSQAN IHFPPFISKD SFENQDYAPK ASLQGIKRTY SSMTRNPSNA  180
QDHIIAERRR REKLGERFIA LSAIVPGLKK MDKASVLAEA INYVKELQER IKLFEEQTKK  240
RTVESVVFVK KSQLSADDDT SSCNENSDYY SDEALLEIEA RISEKDVLIR IHCEKQKGAI  300
VKILSEIEKL HLIVVNSSVL PFGNSTFDIT IIAQKGNEFN MTTKDLVKTL RVALLKEM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1187192ERRRRE
2188193RRRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.16e-75bHLH family protein