PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023893864.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

GATA

Protein Properties

Length: 924aa MW: 99440.1 Da PI: 7.6939

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023893864.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	59	6.1e-19	677	710	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nC t +TplWRr+p+g++ LCnaCGl+ +++g+ XP_023893864.1 677 CTNCFTQTTPLWRRNPEGHP-LCNACGLFLKLHGV 710 ******************.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 924 aa Download sequence
MSRAAPPRQR GAPDDVRSSV ALSDDSGDAA TFSDVTVDSP RHVRVPTIFN DSSSGSSSAI 60 HSLTSASTLS TLDGKLDLSP SDITARRGLS KPFFDQWGDD AIAEQRESPE EMQKNDPLGT 120 QIWKLYHKTK GQLPNSERLE NLSWRMMSMN LRRKELERQQ DVKRLAARPH AQNTPSGIAQ 180 LRRSSEKVGK SDSQDEQMDL DDFLVPSSIA TPGDDSPVSN LPELAPSSIS TVSAIPIKQQ 240 HRLQAEDLSL ARASAPNINA LDSARPNQEF GYVQRHVRKT SIDERRPPKR RAEASPQVMM 300 PRDPVDDSAL QTYSLDAMPT HHPTQGHHPT LPFNLQTFDL DLDPIMSSAG PMQQQFSFSP 360 VGSPLFSGDT MNQMYNMPPN MAVHHNSSSL RSAGGSALPS NVSTPQPVPE SNEQMFFGST 420 APPHSSMPNF HQQAHHASQP SMQQHPQQQF MFNSNTESMY NSISSSLPAH NHFPQPTFHM 480 PGHLDPTQVM AQDFQQPNTM MAQRHDQMFT FGGDSDNEDD DSMQFQDQSM MMHQSFSPME 540 DTTAEMSGGF QWDNNLSNQF NPTAARYPGG PPRKGVTIGS AEMIPSPPGW GAGSLGRGHG 600 STASVSDIRN RGGDQRTKKI PRTTSTPNTV GMATGMFSIH AQPSPTSPND SGFNSTAPSR 660 PGSPRLGGDN NGVPTTCTNC FTQTTPLWRR NPEGHPLCNA CGLFLKLHGV VRPLSLKTDV 720 IKKRNRGSGN SMPVGTSRSK KVASRKNSVA QASATTPTSG KGSNHEADSP KSNTGSAGTG 780 TAATTPTSSG APEKPTKTVV AIAPGPPKPN TQTLSLGPAR SVGPRRGRRQ SKASISTGGN 840 DIEMQTVEET SPGKAGSRKA KDAQNQQPSL VSNNMTLQSD NGSMQAATVS QGGGSAPSQD 900 LSISGIPSGM IQGPQEWEWL TMSL

Sequence ? help Back to Top

Protein Sequence Length: 924 aa Download sequence

MSRAAPPRQR GAPDDVRSSV ALSDDSGDAA TFSDVTVDSP RHVRVPTIFN DSSSGSSSAI  60
HSLTSASTLS TLDGKLDLSP SDITARRGLS KPFFDQWGDD AIAEQRESPE EMQKNDPLGT  120
QIWKLYHKTK GQLPNSERLE NLSWRMMSMN LRRKELERQQ DVKRLAARPH AQNTPSGIAQ  180
LRRSSEKVGK SDSQDEQMDL DDFLVPSSIA TPGDDSPVSN LPELAPSSIS TVSAIPIKQQ  240
HRLQAEDLSL ARASAPNINA LDSARPNQEF GYVQRHVRKT SIDERRPPKR RAEASPQVMM  300
PRDPVDDSAL QTYSLDAMPT HHPTQGHHPT LPFNLQTFDL DLDPIMSSAG PMQQQFSFSP  360
VGSPLFSGDT MNQMYNMPPN MAVHHNSSSL RSAGGSALPS NVSTPQPVPE SNEQMFFGST  420
APPHSSMPNF HQQAHHASQP SMQQHPQQQF MFNSNTESMY NSISSSLPAH NHFPQPTFHM  480
PGHLDPTQVM AQDFQQPNTM MAQRHDQMFT FGGDSDNEDD DSMQFQDQSM MMHQSFSPME  540
DTTAEMSGGF QWDNNLSNQF NPTAARYPGG PPRKGVTIGS AEMIPSPPGW GAGSLGRGHG  600
STASVSDIRN RGGDQRTKKI PRTTSTPNTV GMATGMFSIH AQPSPTSPND SGFNSTAPSR  660
PGSPRLGGDN NGVPTTCTNC FTQTTPLWRR NPEGHPLCNA CGLFLKLHGV VRPLSLKTDV  720
IKKRNRGSGN SMPVGTSRSK KVASRKNSVA QASATTPTSG KGSNHEADSP KSNTGSAGTG  780
TAATTPTSSG APEKPTKTVV AIAPGPPKPN TQTLSLGPAR SVGPRRGRRQ SKASISTGGN  840
DIEMQTVEET SPGKAGSRKA KDAQNQQPSL VSNNMTLQSD NGSMQAATVS QGGGSAPSQD  900
LSISGIPSGM IQGPQEWEWL TMSL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	286	291	RPPKRR