PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023894159.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 224aa    MW: 26026.8 Da    PI: 9.2558
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023894159.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR185.96.3e-2729117189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                     +fYneY+++vGFs+rk++ +k k+ g +t+r+fvC keg r ++k++ ++ +++raetr+gC+a+l++ +++ ++k++v+k+  eHnH l
  XP_023894159.1  29 DFYNEYGRKVGFSIRKEYVNKCKKIGVVTSRRFVCAKEGVRGKNKRD-QDIKNPRAETRCGCEARLVIVLNQdNKKYMVNKFIAEHNHYL 117
                     6********************************************99.99********************999***************88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MGIHVLSNVP MESTPFKGME FEVDEIAYDF YNEYGRKVGF SIRKEYVNKC KKIGVVTSRR  60
FVCAKEGVRG KNKRDQDIKN PRAETRCGCE ARLVIVLNQD NKKYMVNKFI AEHNHYLHLP  120
STLHMMPSQQ KVAATHAIKI DLAHESGIRL KQSYELLSKQ VGGYDNLGIT KQDHKNYLCT  180
KRQRDMEHRE AANLGRYFSH QLKENPSYYF ATQLDCEELI TNIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-38FAR1 family protein