PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023894274.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 254aa    MW: 28003.7 Da    PI: 5.4637
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023894274.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.61.5e-133274955
             AP2  9 dkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ +grWvAeI+d      ++ r+ lg+++taeeAa+a+++a+  l+g
  XP_023894274.1 32 RP-SGRWVAEIKDtI----QKIRVCLGTYDTAEEAARAYDEAACLLRG 74
                    77.7*********33....35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MVSDQMMEQS ATLAAPGGAR RNGKQYIGEG QRPSGRWVAE IKDTIQKIRV CLGTYDTAEE  60
AARAYDEAAC LLRGANIRTN FYPCSPTHLR PALPSKITNL LLLRLQARHI ASASMVATSL  120
PISNRKLNTS VGVTNSDNVT ESFESSSVRL AEGWARALDM DDGKSQGGGK EEVGEKEGCD  180
MEHIDFQFLD AVVSTCYCSP FKIAEEMAEP VEQETYGNEP SLLGETMKRM KYERKFSASL  240
YAFNGIPECL RLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.16e-16ERF family protein