PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023894430.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 780aa MW: 89656.5 Da PI: 8.14

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023894430.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.5	3.4e-21	68	158	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrng..eitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YA+ vGFs+r+sk +k +++g + +r f+Cs+eg r ++k++ ++ + +r etr+gC+a++k++ ++++k++v k++++H+H la XP_023894430.1 68 DFYNSYARVVGFSIRRSKGHKGDKDGshKWLDRVFCCSCEGIRGNDKRD-DNVKCHRLETRCGCRAEMKISCRYSEKYCVVKFVSKHTHVLA 158 6**************9999966651156789*********999.99999********************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 780 aa Download sequence
MSDSNYHTKT DSQSVRKLNF EDEDSPLVTV EQLEPISIDS NDKIHANVEE EVIPKLGIEF 60 ETEQDAYDFY NSYARVVGFS IRRSKGHKGD KDGSHKWLDR VFCCSCEGIR GNDKRDDNVK 120 CHRLETRCGC RAEMKISCRY SEKYCVVKFV SKHTHVLASP RKRIFLRSQR SINPAQAVEA 180 ELADSSGIAP RASVRLMARR VGGLDNLGFI PEDYNNYLRT RRTEEMKSGD TGGLLEYLQR 240 MQSEDLNFSY AIQVDLDDLI TNIFWANGRM KLDYEYFGDK AMFGKKPQTI LTDQDAAMAK 300 ALASQWPETL HRLCVWHMYQ NAAKNLKEEF GRYSTFAADF SSCVYDHDYE DDFLDAWDNM 360 LDKYDLKSNS WLQRQFELRE KWALVYGRKT FCADMSTTQR SESMNSQIKR YITYNYDLLR 420 FFHHFQRLVD DRRFEELRAD FKATQSKPSL EYLVEIMKHA ASVYTPAVFK LFNRELWLTW 480 DCELHKEGEV GSVVKYKVIS PRKSCQHIVQ FDLLASQVMC SCNKFEFVGI LCAHALKVLS 540 LQNCKRVPNQ YILKRWTKDA KVGSAMKNYM HVGSHDQNAN VGSRYKVLLK LYSNLAARAA 600 LTNETFRISL DAHESTLNKV EANLKNLSIE ESTVGSTHFK SKAQQANDNV QPTNCEGNKI 660 KGIKLKGRQA CVGTSRRIKG ALEKATRKRK RQTKASSHIQ QLTPEDNMAN LNTTGFTDML 720 NLTQEDSMAN LNTPGFTDML NLTQEDSMTN LNTPGFTDML NLIQAQLPKV GNQRNYEDVE

Sequence ? help Back to Top

Protein Sequence Length: 780 aa Download sequence

MSDSNYHTKT DSQSVRKLNF EDEDSPLVTV EQLEPISIDS NDKIHANVEE EVIPKLGIEF  60
ETEQDAYDFY NSYARVVGFS IRRSKGHKGD KDGSHKWLDR VFCCSCEGIR GNDKRDDNVK  120
CHRLETRCGC RAEMKISCRY SEKYCVVKFV SKHTHVLASP RKRIFLRSQR SINPAQAVEA  180
ELADSSGIAP RASVRLMARR VGGLDNLGFI PEDYNNYLRT RRTEEMKSGD TGGLLEYLQR  240
MQSEDLNFSY AIQVDLDDLI TNIFWANGRM KLDYEYFGDK AMFGKKPQTI LTDQDAAMAK  300
ALASQWPETL HRLCVWHMYQ NAAKNLKEEF GRYSTFAADF SSCVYDHDYE DDFLDAWDNM  360
LDKYDLKSNS WLQRQFELRE KWALVYGRKT FCADMSTTQR SESMNSQIKR YITYNYDLLR  420
FFHHFQRLVD DRRFEELRAD FKATQSKPSL EYLVEIMKHA ASVYTPAVFK LFNRELWLTW  480
DCELHKEGEV GSVVKYKVIS PRKSCQHIVQ FDLLASQVMC SCNKFEFVGI LCAHALKVLS  540
LQNCKRVPNQ YILKRWTKDA KVGSAMKNYM HVGSHDQNAN VGSRYKVLLK LYSNLAARAA  600
LTNETFRISL DAHESTLNKV EANLKNLSIE ESTVGSTHFK SKAQQANDNV QPTNCEGNKI  660
KGIKLKGRQA CVGTSRRIKG ALEKATRKRK RQTKASSHIQ QLTPEDNMAN LNTTGFTDML  720
NLTQEDSMAN LNTPGFTDML NLTQEDSMTN LNTPGFTDML NLIQAQLPKV GNQRNYEDVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-94	FAR1 family protein