PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023894847.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 214aa    MW: 23984.3 Da    PI: 4.9597
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023894847.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.71e-13108211398
                     EE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE...EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
              B3   3 kvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkl.iyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr 87 
                      +  ps+   ++r +lp+  + ++        +++k +  t++l+    r W +kl iy+++ g+ +v+++GW+  +++n L++gD++vF+l+ r
  XP_023894847.1 108 VTIHPSYIDGKDRAILPRAII-NYlpregftkDYNKGSILTVKLQ-VVDRLWPMKLyIYERSVGSsCVISAGWSTVARENTLRVGDVCVFELIMR 200
                     556677777888888888877.55688877765555444444443.3569*****95555555556***************************99 PP

                     SEE..EEEEE- CS
              B3  88 sefelvvkvfr 98 
                     ++  l+v++fr
  XP_023894847.1 201 DDVVLKVHIFR 211
                     99999***997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
FRYIGNSHFD VLIFDATATE IDYTLDDQAQ VCRMEDNESD DDSIEIMDDF TKGEGTGLAH  60
GVGGNRVGCT SSSLVKLELH QCPKKDGGVA ENLVRANAFK LENPLFTVTI HPSYIDGKDR  120
AILPRAIINY LPREGFTKDY NKGSILTVKL QVVDRLWPMK LYIYERSVGS SCVISAGWST  180
VARENTLRVG DVCVFELIMR DDVVLKVHIF RCIE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-16B3 family protein