PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023894887.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Dof

Protein Properties

Length: 488aa MW: 53099.8 Da PI: 8.2928

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023894887.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.8	1.4e-39	132	192	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+ss XP_023894887.1 132 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSS 192 7899******************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MLELKDPAIK LFGKTIPLPL RRQTLTDESS VAEDCSDQNL HSPNISSSSR EESSAREREG 60 NKETLGRELI TNKQEDGTSH QISEDSKDPT SSSTSENPKT PSVDIETSSI KASKNGEQSE 120 TSISQEKTLK KPDKILPCPR CNSMDTKFCY YNNYNVNQPR HFCKNCQRYW TAGGTMRNVP 180 VGAGRRKNKN SSNSHYRHII VSEALQTARA NGVQNPAFGD NSTVLTFGSD SPLCESMASV 240 LNLARKTQNR VPNVFHRPER TLVSGGDTGD DYSSGSSVTA SNSTEKEFNA GLQESAVKSY 300 QGFPPQLPCF PGTPWSLPWN SAHWSSAMPP PALCPSGFPV SFYPAPAYWG CNVSGSWNIQ 360 CLSPPSSSLS HGSQSSAPNS PTLGKHSRDG NIINPANSLK ESVKENSSER CVWIPKTLRI 420 DDPNEAAKSS IWTTLGIKNE KTSSINSGGL FKAFQTKGND KSKVVETSAV LQANPAALSR 480 SLNFHEST

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MLELKDPAIK LFGKTIPLPL RRQTLTDESS VAEDCSDQNL HSPNISSSSR EESSAREREG  60
NKETLGRELI TNKQEDGTSH QISEDSKDPT SSSTSENPKT PSVDIETSSI KASKNGEQSE  120
TSISQEKTLK KPDKILPCPR CNSMDTKFCY YNNYNVNQPR HFCKNCQRYW TAGGTMRNVP  180
VGAGRRKNKN SSNSHYRHII VSEALQTARA NGVQNPAFGD NSTVLTFGSD SPLCESMASV  240
LNLARKTQNR VPNVFHRPER TLVSGGDTGD DYSSGSSVTA SNSTEKEFNA GLQESAVKSY  300
QGFPPQLPCF PGTPWSLPWN SAHWSSAMPP PALCPSGFPV SFYPAPAYWG CNVSGSWNIQ  360
CLSPPSSSLS HGSQSSAPNS PTLGKHSRDG NIINPANSLK ESVKENSSER CVWIPKTLRI  420
DDPNEAAKSS IWTTLGIKNE KTSSINSGGL FKAFQTKGND KSKVVETSAV LQANPAALSR  480
SLNFHEST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	1e-107	Dof family protein