PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023894901.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 454aa MW: 52810.5 Da PI: 7.8257

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023894901.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.9	1.6e-23	30	117	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 fYneY++++ Fs+rk++ +k k+ g +t+r+fvC keg r ++k++ ++ +++raetr+gC+a+l++ +++ ++k++++++ eHnH l XP_023894901.1 30 FYNEYGRKASFSIRKEYVNKCKKIGMVTSRRFVCAKEGVRGKDKRD-QNVKNPRAETRCGCEARLVIILNRdSKKYVMSEFIAEHNHYL 117 9****************************************999.999*************9999899***********88 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
MRIHVPSNVP MESTPFKGME FEADEIAYGF YNEYGRKASF SIRKEYVNKC KKIGMVTSRR 60 FVCAKEGVRG KDKRDQNVKN PRAETRCGCE ARLVIILNRD SKKYVMSEFI AEHNHYLHLP 120 STVHMMPSQW KVAVTHAIEI DLAHESGLRL KQSYELLSKQ VGGYDNLGFT KQDHKNYLRT 180 KRQRDMEHGA AASLGRYFSH QLKENPSYYF ATQLDCEELI TNIFWADARM IIDYSHFGDV 240 ITFDTTYSTN RDARPLGVFL SLNHHSEIVV FGGALLYDET IESFVWLFET FLEAMSEKKP 300 ITIFTDQDAA MSVAIKVVMP KTYHALCIGI CDEFLTAWNE MLDKYDVREN KWLIDLFKLK 360 EKWAQAYVKR TFTAGMKTTQ LSESFNADLK DCLRTDLNIV EFFTHFETVV NQKRDKELEA 420 EYNPRQKFPR LNLKSSPMLN QVATVYTPKL FDLF

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

MRIHVPSNVP MESTPFKGME FEADEIAYGF YNEYGRKASF SIRKEYVNKC KKIGMVTSRR  60
FVCAKEGVRG KDKRDQNVKN PRAETRCGCE ARLVIILNRD SKKYVMSEFI AEHNHYLHLP  120
STVHMMPSQW KVAVTHAIEI DLAHESGLRL KQSYELLSKQ VGGYDNLGFT KQDHKNYLRT  180
KRQRDMEHGA AASLGRYFSH QLKENPSYYF ATQLDCEELI TNIFWADARM IIDYSHFGDV  240
ITFDTTYSTN RDARPLGVFL SLNHHSEIVV FGGALLYDET IESFVWLFET FLEAMSEKKP  300
ITIFTDQDAA MSVAIKVVMP KTYHALCIGI CDEFLTAWNE MLDKYDVREN KWLIDLFKLK  360
EKWAQAYVKR TFTAGMKTTQ LSESFNADLK DCLRTDLNIV EFFTHFETVV NQKRDKELEA  420
EYNPRQKFPR LNLKSSPMLN QVATVYTPKL FDLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-96	FAR1 family protein