PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023895064.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family E2F/DP
Protein Properties Length: 209aa    MW: 22664.9 Da    PI: 10.6394
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023895064.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP83.91.3e-26145209170
         E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwk 70 
                     r+++sL+llt+kf++ll+++e+g+++ln++a++L   +v  ++RRiYDi+NVLe+++liekk kn+i+wk
  XP_023895064.1 145 RYDSSLGLLTKKFINLLKQAEDGNLDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIHWK 209
                     6899******************************...99..****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MSGGARAPNR PAPPPPTVAS QILPPPPPMK RNLAVLASTK PPFVPPDDYH RFSSVVADRE  60
AEALVVRSPL LKRKNGTDDN EVQSIDWTNS PGYTSVVNSP LKTPVSAKGG RIYNRSKGTK  120
GNRSGPQTPV ANAGSPSPLT PGSCRYDSSL GLLTKKFINL LKQAEDGNLD LNKAAETLEV  180
QKRRIYDITN VLEGIGLIEK KLKNRIHWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36010.14e-68E2F/DP family protein