PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023895068.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

AP2

Protein Properties

Length: 359aa MW: 40739.9 Da PI: 7.9773

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023895068.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.1	6.9e-16	48	108	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkklege 56 s y+GV++++++gr++A+++d ++n k+ ++++lg ++ +e Aa a++ a++k++ge XP_023895068.1 48 SIYRGVTRHRWTGRYEAHLWDkNCWNEsqnKKgRQVYLGAYDDEEAAAHAYDLAALKYWGE 108 57*****************999955656446***********************997 PP
2	AP2	51.2	3.1e-16	150	201	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g XP_023895068.1 150 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 201 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MAKSSQKNQK NNANSSNNNN NTNSSNTVTK VKRTRRSVPR DSPPQRSSIY RGVTRHRWTG 60 RYEAHLWDKN CWNESQNKKG RQVYLGAYDD EEAAAHAYDL AALKYWGEET ILNFPLSIYH 120 KQLKEMEGLS REEYIGSLRR KSSGFSRGVS KYRGVARHHH NGRWEARIGR VFGNKYLYLG 180 TYATQEEAAT AYDMAAIEYR GLNAVTNFDL SRYIKWLKPN KDNSSNSTDY NPSLHIPNVE 240 PNLTPNPNNQ ELASTFLHNQ QTYSSGETLL TQPRPAATAT SALGLLLQSS KFREMMEMSS 300 VAECSPMPSE SDPPQSSFPD DIQTYFDCQD SSVYGEGDDN IFGELKSYVP PVFQCDFEA

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MAKSSQKNQK NNANSSNNNN NTNSSNTVTK VKRTRRSVPR DSPPQRSSIY RGVTRHRWTG  60
RYEAHLWDKN CWNESQNKKG RQVYLGAYDD EEAAAHAYDL AALKYWGEET ILNFPLSIYH  120
KQLKEMEGLS REEYIGSLRR KSSGFSRGVS KYRGVARHHH NGRWEARIGR VFGNKYLYLG  180
TYATQEEAAT AYDMAAIEYR GLNAVTNFDL SRYIKWLKPN KDNSSNSTDY NPSLHIPNVE  240
PNLTPNPNNQ ELASTFLHNQ QTYSSGETLL TQPRPAATAT SALGLLLQSS KFREMMEMSS  300
VAECSPMPSE SDPPQSSFPD DIQTYFDCQD SSVYGEGDDN IFGELKSYVP PVFQCDFEA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	1e-100	AP2 family protein