PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023895233.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 256aa    MW: 29059.6 Da    PI: 9.5107
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023895233.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.34.9e-173791698
                    EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                    l+lp kf++ehg k   s   tl  ++g +W+v+l  +k  + +++ +GW++Fv+ + ++ g f+vFk++g+s+f  +v vf+
  XP_023895233.1  3 LRLPEKFVREHGDK--LSGVATLAVPNGCTWQVRL--EKANNNIWFHGGWRDFVEYHSINYGYFLVFKYKGNSKF--HVLVFD 79
                    89*********977..6779***************..99999*****************************9999..999987 PP
2B352.21.1e-16161252699
                     ..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3   6 tpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                     +p+++l ++ +++  +f +++  g+     k ++l+ +sg+ W  +++++ +  +  +++ GWk F+++ng+kegD++vF+l++r+e  l+v++f
  XP_023895233.1 161 IPAYSLIRNFVYVCPEFSKNYacGK-----KNIKLQASSGKCWPCQFCFKDGTTSpKTIGVGWKPFARDNGIKEGDVCVFELINRKEVVLKVSIF 250
                     6888888999999999*98885432.....46***************99655555699**************************99999*****9 PP

                     -S CS
              B3  98 rk 99 
                     r 
  XP_023895233.1 251 RV 252
                     96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MKLRLPEKFV REHGDKLSGV ATLAVPNGCT WQVRLEKANN NIWFHGGWRD FVEYHSINYG  60
YFLVFKYKGN SKFHVLVFDM TTTEIKYPSN GDKKRQGSLN ENEMSTPQEL CVKEEVDTEL  120
IVIENLPMSS ARGSVLSGGG ERALQAARMF KPKNPSFIRV IPAYSLIRNF VYVCPEFSKN  180
YACGKKNIKL QASSGKCWPC QFCFKDGTTS PKTIGVGWKP FARDNGIKEG DVCVFELINR  240
KEVVLKVSIF RVTEFA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.14e-27B3 family protein