PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023895272.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family Dof
Protein Properties Length: 282aa    MW: 31581 Da    PI: 4.2589
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023895272.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof118.13.4e-373287661
          zf-Dof  6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                     +cprC s ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rkn++ 
  XP_023895272.1 32 PNCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRG 87
                    58***************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MFTASCDQML QCPPRPLQIM DRMLKPNVEF APNCPRCASP NTKFCYYNNY SLSQPRYFCK  60
GCRRYWTKGG SLRNVPVGGG CRKNRRGKSS RQLPQTQRVS VTNSSKYANE QSTDSSSSNG  120
DSSTNGSGID LAVVFANFLN QNPSNNIEQP EFMTVPDLVP NDSNPQPDSQ NCLNSSAFES  180
QNPIEEGDIL FQGLGQDEKV QEFMEDDDVN AFGLQSLLDD EVVQDVLWSD TASLPNLMWQ  240
PMVQVQELES FQSNDQLRIS TNLISDCWSS LDLSGFEVFS RP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.12e-41Dof family protein