PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023895383.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 188aa    MW: 20575 Da    PI: 8.5006
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023895383.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.13.2e-055476123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++C++ Fs++  L  H++ H
  XP_023895383.1 54 FECQYCHREFSNSQALGGHQNAH 76
                    89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MSGLDNANPY GSESDSESDK KPRSSSVLKL FGFPVTGCDE SVTEPCDSKN KRAFECQYCH  60
REFSNSQALG GHQNAHKRER ERAKRAQFPN DHDHHQRFVA VPIIVAHAGR SGPFVSSSSC  120
GSPSFVGPVG VARFPAVNPY HMYVGRPRQL PVVGPADLGR RKALSMTEEV KGGDELDLHL  180
RLAPSNTM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24625.15e-10C2H2 family protein