PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023895392.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

CAMTA

Protein Properties

Length: 916aa MW: 103920 Da PI: 7.5976

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023895392.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	166.1	5.7e-52	28	143	4	118
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 e ++rwl+++ei+aiL n++++++ ++ + pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg e +++yYah+++nptf rr XP_023895392.1 28 EaSTRWLRPNEIHAILCNYKNFSINVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGDEERIHVYYAHGQDNPTFVRR 122 4589***************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylevk 118 cywlL+++le+ivlvhy+e++ XP_023895392.1 123 CYWLLDKSLEHIVLVHYRETQ 143 ****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 916 aa Download sequence
MMEGQLVGSE IHGFHTLQDL DLGNIREEAS TRWLRPNEIH AILCNYKNFS INVKPVNLPK 60 SGTIVLFDRK MLRNFRKDGH NWKKKKDGKT VKEAHEHLKV GDEERIHVYY AHGQDNPTFV 120 RRCYWLLDKS LEHIVLVHYR ETQELQGSPG TPVNSNSSSG SSAPWLLTEE LDSGGNHAHY 180 GESAGTVQNH ELRLHEINTL EWDDLLLTND LNNSIVPKGA KVSSIDQTNQ ALNDSLHFGV 240 NNSSAEVSSF SNLTEAIARS DNIYSSFPDS IYDQAMKGQL NANVPRRDSI TMGTNDSLDI 300 LVDDGLQSQD SFGRWINQIM AESPGSVDDS VLESSISSVH ESFVSSMTDH SQSSVPEQIF 360 SITDVSPAWA FSTEKTKIIV IGFFHKECLH LAKSSLLCVC GDVCVPAETV QVGVYRCFVL 420 PHSFGPVSLF MSFDGHKPIS QVLNFEYRIP SSVDPKNLLE EKCKWEDFQY QLRLAYLLFS 480 TSKNLNILSN KVSPNSLKEA KNFAHKTSNI LHSFEKFIKS VEENKVPFPQ AKDVLFEHTL 540 KNRLKEYLLE RVVERPKTTE HSKTTEYDAQ GRGVIHLCAI LGYTWAVPLF SWSGLSLDFR 600 DKYGWTALHW AAFCGREKMV AALLSAGAKP NLVTDPTPKN PGGSTAADLA SLKGYEGLAA 660 YLSEKALVEQ FKDMSMAGNI SGSLDTSATD TVITENLSED QIYLKDTLAA YRTTAEAAAR 720 IQAAFRDHSL KVRTKEVEFS APEDEARSII AAMKIQHAFR SFESKKKMAA AARIQYRFRT 780 WKIRKDFLTM RRHAIKIQAA FRGFQVRRQY RKILWSVGVL EKAVLRWRLK RRGFRGFQVD 840 PMEPVPDQRP ESDTEEDFYR ASRKQAEERV ERSVVRVQAM FRSKKAQEEY RRMKMTHNQA 900 RLEYEGFLDS DTDMTY

Sequence ? help Back to Top

Protein Sequence Length: 916 aa Download sequence

MMEGQLVGSE IHGFHTLQDL DLGNIREEAS TRWLRPNEIH AILCNYKNFS INVKPVNLPK  60
SGTIVLFDRK MLRNFRKDGH NWKKKKDGKT VKEAHEHLKV GDEERIHVYY AHGQDNPTFV  120
RRCYWLLDKS LEHIVLVHYR ETQELQGSPG TPVNSNSSSG SSAPWLLTEE LDSGGNHAHY  180
GESAGTVQNH ELRLHEINTL EWDDLLLTND LNNSIVPKGA KVSSIDQTNQ ALNDSLHFGV  240
NNSSAEVSSF SNLTEAIARS DNIYSSFPDS IYDQAMKGQL NANVPRRDSI TMGTNDSLDI  300
LVDDGLQSQD SFGRWINQIM AESPGSVDDS VLESSISSVH ESFVSSMTDH SQSSVPEQIF  360
SITDVSPAWA FSTEKTKIIV IGFFHKECLH LAKSSLLCVC GDVCVPAETV QVGVYRCFVL  420
PHSFGPVSLF MSFDGHKPIS QVLNFEYRIP SSVDPKNLLE EKCKWEDFQY QLRLAYLLFS  480
TSKNLNILSN KVSPNSLKEA KNFAHKTSNI LHSFEKFIKS VEENKVPFPQ AKDVLFEHTL  540
KNRLKEYLLE RVVERPKTTE HSKTTEYDAQ GRGVIHLCAI LGYTWAVPLF SWSGLSLDFR  600
DKYGWTALHW AAFCGREKMV AALLSAGAKP NLVTDPTPKN PGGSTAADLA SLKGYEGLAA  660
YLSEKALVEQ FKDMSMAGNI SGSLDTSATD TVITENLSED QIYLKDTLAA YRTTAEAAAR  720
IQAAFRDHSL KVRTKEVEFS APEDEARSII AAMKIQHAFR SFESKKKMAA AARIQYRFRT  780
WKIRKDFLTM RRHAIKIQAA FRGFQVRRQY RKILWSVGVL EKAVLRWRLK RRGFRGFQVD  840
PMEPVPDQRP ESDTEEDFYR ASRKQAEERV ERSVVRVQAM FRSKKAQEEY RRMKMTHNQA  900
RLEYEGFLDS DTDMTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein