PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023895393.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

CAMTA

Protein Properties

Length: 914aa MW: 103703 Da PI: 7.7317

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023895393.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	166.1	5.7e-52	28	143	4	118
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 e ++rwl+++ei+aiL n++++++ ++ + pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg e +++yYah+++nptf rr XP_023895393.1 28 EaSTRWLRPNEIHAILCNYKNFSINVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGDEERIHVYYAHGQDNPTFVRR 122 4589***************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylevk 118 cywlL+++le+ivlvhy+e++ XP_023895393.1 123 CYWLLDKSLEHIVLVHYRETQ 143 ****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 914 aa Download sequence
MMEGQLVGSE IHGFHTLQDL DLGNIREEAS TRWLRPNEIH AILCNYKNFS INVKPVNLPK 60 SGTIVLFDRK MLRNFRKDGH NWKKKKDGKT VKEAHEHLKV GDEERIHVYY AHGQDNPTFV 120 RRCYWLLDKS LEHIVLVHYR ETQELQGSPG TPVNSNSSSG SSAPWLLTEE LDSGGNHAHY 180 GAGTVQNHEL RLHEINTLEW DDLLLTNDLN NSIVPKGAKV SSIDQTNQAL NDSLHFGVNN 240 SSAEVSSFSN LTEAIARSDN IYSSFPDSIY DQAMKGQLNA NVPRRDSITM GTNDSLDILV 300 DDGLQSQDSF GRWINQIMAE SPGSVDDSVL ESSISSVHES FVSSMTDHSQ SSVPEQIFSI 360 TDVSPAWAFS TEKTKIIVIG FFHKECLHLA KSSLLCVCGD VCVPAETVQV GVYRCFVLPH 420 SFGPVSLFMS FDGHKPISQV LNFEYRIPSS VDPKNLLEEK CKWEDFQYQL RLAYLLFSTS 480 KNLNILSNKV SPNSLKEAKN FAHKTSNILH SFEKFIKSVE ENKVPFPQAK DVLFEHTLKN 540 RLKEYLLERV VERPKTTEHS KTTEYDAQGR GVIHLCAILG YTWAVPLFSW SGLSLDFRDK 600 YGWTALHWAA FCGREKMVAA LLSAGAKPNL VTDPTPKNPG GSTAADLASL KGYEGLAAYL 660 SEKALVEQFK DMSMAGNISG SLDTSATDTV ITENLSEDQI YLKDTLAAYR TTAEAAARIQ 720 AAFRDHSLKV RTKEVEFSAP EDEARSIIAA MKIQHAFRSF ESKKKMAAAA RIQYRFRTWK 780 IRKDFLTMRR HAIKIQAAFR GFQVRRQYRK ILWSVGVLEK AVLRWRLKRR GFRGFQVDPM 840 EPVPDQRPES DTEEDFYRAS RKQAEERVER SVVRVQAMFR SKKAQEEYRR MKMTHNQARL 900 EYEGFLDSDT DMTY

Sequence ? help Back to Top

Protein Sequence Length: 914 aa Download sequence

MMEGQLVGSE IHGFHTLQDL DLGNIREEAS TRWLRPNEIH AILCNYKNFS INVKPVNLPK  60
SGTIVLFDRK MLRNFRKDGH NWKKKKDGKT VKEAHEHLKV GDEERIHVYY AHGQDNPTFV  120
RRCYWLLDKS LEHIVLVHYR ETQELQGSPG TPVNSNSSSG SSAPWLLTEE LDSGGNHAHY  180
GAGTVQNHEL RLHEINTLEW DDLLLTNDLN NSIVPKGAKV SSIDQTNQAL NDSLHFGVNN  240
SSAEVSSFSN LTEAIARSDN IYSSFPDSIY DQAMKGQLNA NVPRRDSITM GTNDSLDILV  300
DDGLQSQDSF GRWINQIMAE SPGSVDDSVL ESSISSVHES FVSSMTDHSQ SSVPEQIFSI  360
TDVSPAWAFS TEKTKIIVIG FFHKECLHLA KSSLLCVCGD VCVPAETVQV GVYRCFVLPH  420
SFGPVSLFMS FDGHKPISQV LNFEYRIPSS VDPKNLLEEK CKWEDFQYQL RLAYLLFSTS  480
KNLNILSNKV SPNSLKEAKN FAHKTSNILH SFEKFIKSVE ENKVPFPQAK DVLFEHTLKN  540
RLKEYLLERV VERPKTTEHS KTTEYDAQGR GVIHLCAILG YTWAVPLFSW SGLSLDFRDK  600
YGWTALHWAA FCGREKMVAA LLSAGAKPNL VTDPTPKNPG GSTAADLASL KGYEGLAAYL  660
SEKALVEQFK DMSMAGNISG SLDTSATDTV ITENLSEDQI YLKDTLAAYR TTAEAAARIQ  720
AAFRDHSLKV RTKEVEFSAP EDEARSIIAA MKIQHAFRSF ESKKKMAAAA RIQYRFRTWK  780
IRKDFLTMRR HAIKIQAAFR GFQVRRQYRK ILWSVGVLEK AVLRWRLKRR GFRGFQVDPM  840
EPVPDQRPES DTEEDFYRAS RKQAEERVER SVVRVQAMFR SKKAQEEYRR MKMTHNQARL  900
EYEGFLDSDT DMTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein