PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023895429.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MIKC_MADS
Protein Properties Length: 215aa    MW: 24481 Da    PI: 9.6758
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023895429.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF97.36.3e-31958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien++nrqvtf+kRrng+lKKA+ELSvLC+aeva+i+fss+g+lyey+
  XP_023895429.1  9 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCEAEVALIVFSSRGRLYEYA 58
                    79***********************************************8 PP
2K-box97.42.1e-32801737100
           K-box   7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                     +s ++++a+++qqe++kL++ i+n+q+ +RhllGe+L+sLs+ke++qLe+++e++l++iRskK+e+ll++ie++qk+  el++e  +L++k++e
  XP_023895429.1  80 SSIAQTNAQYYQQESTKLRQLIQNMQNANRHLLGEGLSSLSIKEMKQLESRIEQGLTRIRSKKHEMLLAEIEYSQKRVMELENESVYLQAKIAE 173
                     348999*************************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MGRGKIEIKR IENTTNRQVT FCKRRNGLLK KAYELSVLCE AEVALIVFSS RGRLYEYANN  60
STKSTIERYK KACNDGSGTS SIAQTNAQYY QQESTKLRQL IQNMQNANRH LLGEGLSSLS  120
IKEMKQLESR IEQGLTRIRS KKHEMLLAEI EYSQKRVMEL ENESVYLQAK IAEVERLQQV  180
NLNMSGSELN AIQALSCNFF TPILVEGSTS FAQPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09960.11e-104MIKC_MADS family protein