PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023895915.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 239aa    MW: 26746.4 Da    PI: 7.3453
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023895915.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH253.4e-0882129454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++  rE+ RRd +N++f eL ++l +    + +K +Ka+iL  A + + +L
  XP_023895915.1  82 SKACREKLRRDWLNERFLELGSILDPG---RPPKTDKAAILADAFRMVTQL 129
                     6789**********************8...89************9998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MEIDSSESSN WLFDYGFVEQ ISVPGDPFPS SISGSFSWAP QPLDCCFNTS AEVDCSFRDS  60
DSLKEVGHRK RLRPESCIAS ASKACREKLR RDWLNERFLE LGSILDPGRP PKTDKAAILA  120
DAFRMVTQLR SKAQKLKESN EDLQVKIKEL KAEKNELRDE KQRLKADKDK LEQQVKATIT  180
PQGFLAHPTA MSTAFAAQGQ VSSNKLIPFV GYPSIAMWQF MPPTAVDTSL DHVLRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.12e-91bHLH family protein