PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023896300.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB
Protein Properties Length: 296aa    MW: 33301.1 Da    PI: 6.1753
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023896300.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.93e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg W++eEde+l++ +   G  +W+++++  g+ R++k+c++rw +yl
   XP_023896300.1 14 RGLWSQEEDEKLINFISNNGHSCWSSVPKFAGLQRCGKSCRLRWINYL 61
                     788*******************************************97 PP
2Myb_DNA-binding43.95.4e-1468110246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      gr+++eE  l+ +++  lG++ W+ Ia+ ++ gRt++++k++w++
   XP_023896300.1  68 GRFSPEEVALITELHGILGNK-WAQIAKQLP-GRTDNEVKNFWNT 110
                      8********************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MGHHSCCDKK KVNRGLWSQE EDEKLINFIS NNGHSCWSSV PKFAGLQRCG KSCRLRWINY  60
LRPDLKHGRF SPEEVALITE LHGILGNKWA QIAKQLPGRT DNEVKNFWNT SIRKKLTSHE  120
VPAIATFPDV HFNGNSEEGL FSLNANPNWI LNSQQDQLYL PTPTPNLQGF DHGDLKLEQT  180
NFGANLVQFP PPMAPPSDSS SYDPLWSLGY QPHENFDPNQ EHQNFCSSGA TQHYIGDKLI  240
GPSITTPNYD EDPLIVPMIP NPCEIINGNF DPNQEHQNFC SSGATQHYIG DKLIGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13890.21e-68MYB family protein