PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023896343.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 168aa    MW: 19161.7 Da    PI: 10.3589
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023896343.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.35.6e-1180124347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rWT++E+ l++ + k+l + +W  I+r++ k+R++ q+ s+ qky
   XP_023896343.1  80 RWTEQEHRLFLTGLKELRKVDWIGISRRFVKTRSPSQVASHAQKY 124
                      9*****************99************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MVKKSVIVRR CAQCGLSGHN FKTCSKKNDN NNTTIAIANS NNYNTTNDHD LNKSVSIENR  60
CSKNVENEVE IDAERKKGRR WTEQEHRLFL TGLKELRKVD WIGISRRFVK TRSPSQVASH  120
AQKYYLRQTA IDKKKTSVFD LSLNEAELAP KNSPVSSTVK SFVEKAMD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.12e-27MYB_related family protein