PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023896349.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 139aa    MW: 15486.2 Da    PI: 10.4848
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023896349.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.91.6e-192862135
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                    C+ C+tt TplWR gp g+++LCnaCG++yrkk++
  XP_023896349.1 28 CTDCHTTRTPLWRGGPAGPRSLCNACGIRYRKKRR 62
                    ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MESKTKRSES EDMNSTLLGG VEELKKSCTD CHTTRTPLWR GGPAGPRSLC NACGIRYRKK  60
RRALLSLDKG EAEKCKKNSI NRSNKGKVGV RLKLGLMALG REMGLHRSLG KEKQIMRKLK  120
EEEQAAMLLM ALSCGCVYN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15887RKKRRALLSLDKGEAEKCKKNSINRSNKGK
25988RKKRRALLSLDKGEAEKCKKNSINRSNKGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.11e-34GATA family protein