PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023896446.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 307aa MW: 34270.5 Da PI: 7.1798

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023896446.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	108.7	2.9e-34	154	211	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt+a+C+vkk+vers +dp++v++tYeg+H+h+ XP_023896446.1 154 EDGYRWRKYGQKAVKNSPFPRSYYRCTTASCNVKKRVERSFTDPTIVVTTYEGQHTHP 211 8********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MERKEMIKME ELVGSSSFTD HISDSYPFSG IFDFSEVEKS SLGFMELLGT GVQDYTSPLF 60 DLPPISMAPS APLTAVKECS EVLNQPATPN SSSISSASSE AVNDTEQTNN KAVDQEEEQP 120 DKTKKQLKPK KTNQKRQREP RFAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT 180 TASCNVKKRV ERSFTDPTIV VTTYEGQHTH PSPVMPRQNF AGAPPGSGGV SATSFTMPMP 240 RTLSHYQQQH QQSLINPLTP SNFAFNGLLA NNPGLLRDTR FCTQGAALLK DHGLLQDIVP 300 SYMLKEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47260.1	1e-59	WRKY family protein