PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023896447.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 392aa MW: 44599.6 Da PI: 6.2914

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023896447.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.5	3.7e-51	15	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi++vd++k+ePwd+++ k+ + ++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk + XP_023896447.1 15 VPPGFRFHPTEEELLQYYLRKKVSYEKIDL-DVIRDVDLNKLEPWDIQEvcKIGTtPQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVI 108 69**************************.9***********953433332556******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 s + + +g++ktLvfykgrap+g k+dW+mheyrl XP_023896447.1 109 QS-NCRRIGMRKTLVFYKGRAPHGLKSDWIMHEYRL 143 99.8889*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MPENMSISVN GQSQVPPGFR FHPTEEELLQ YYLRKKVSYE KIDLDVIRDV DLNKLEPWDI 60 QEVCKIGTTP QNEWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKVIQS NCRRIGMRKT 120 LVFYKGRAPH GLKSDWIMHE YRLDDNVTDT DISNAMGEAS QEEGWVVCRI FKKKNLHKTL 180 DSPMSSSFTA ETRSQMFDSC NGGALEQMLQ YMGNGKEEEM NEAKSSARTY LRPIETGMKN 240 GYHERFMKLP SLESPNSTSS QCYYQHNIHP EMIIENEGSS VTNPNSVYSQ MDSAALTNWA 300 AFDRLVASQL NGQTEASRQL ACFNDPANTM PYCSTDHDLQ FSTLRSSSSS SNRSYHPTQD 360 YNSEIDLWGF PRSSSSFSSS DDPLCHVSNA PV

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MPENMSISVN GQSQVPPGFR FHPTEEELLQ YYLRKKVSYE KIDLDVIRDV DLNKLEPWDI  60
QEVCKIGTTP QNEWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKVIQS NCRRIGMRKT  120
LVFYKGRAPH GLKSDWIMHE YRLDDNVTDT DISNAMGEAS QEEGWVVCRI FKKKNLHKTL  180
DSPMSSSFTA ETRSQMFDSC NGGALEQMLQ YMGNGKEEEM NEAKSSARTY LRPIETGMKN  240
GYHERFMKLP SLESPNSTSS QCYYQHNIHP EMIIENEGSS VTNPNSVYSQ MDSAALTNWA  300
AFDRLVASQL NGQTEASRQL ACFNDPANTM PYCSTDHDLQ FSTLRSSSSS SNRSYHPTQD  360
YNSEIDLWGF PRSSSSFSSS DDPLCHVSNA PV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-128	NAC family protein