PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023896534.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 327aa    MW: 36214.3 Da    PI: 7.5018
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023896534.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.92e-094897154
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    r++ +  rE+ RRdr+N+ f eL  ++ ++     +K++Ka+iL  +++ +k+L
  XP_023896534.1 48 RKVQKADREKLRRDRLNEHFVELGNVVDPN----RPKNDKATILADTIQLVKDL 97
                    5677889********************987....79*************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MEFIQNKQPP ISTPTTNIAQ NPRVLSTRPQ PNSSQRSELE LKDCLSARKV QKADREKLRR  60
DRLNEHFVEL GNVVDPNRPK NDKATILADT IQLVKDLTSQ INKLQAEHAT LSEESCELTQ  120
EKNDLREEKA SLKSDIDNLN VQYQQRVRAM FPWAAMDHSV VIAPPSYPYP MPMPMPPGPI  180
PMHPSMQPYP FYGNQNPGVI PNPCSTFVPY VTANTLVEQQ STQNGSQLVH PSNPSPILGK  240
QDSRNKSSGE SNIEKEKDSN DVTTELELKT PGSTEDQSLT SGKRKSKKSW RKENNDTEGS  300
SSSRCSSSSS VKDSSSNSII GGGKAGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.11e-85bHLH family protein