PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023897042.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GRAS
Protein Properties Length: 720aa    MW: 81620 Da    PI: 6.8929
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023897042.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS367.71.6e-1123477162374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      +lL++cA+ v+s+d+  +++lL+++++++sp+gd  +R+a yf++AL+arla+ ++ ly  l++++ s    +e l+ ++++  +sP+  +s++
  XP_023897042.1 347 STLLTQCAQSVASNDQMTTTELLKQIRQHSSPYGDGAERMAYYFANALEARLAN-QPPLYMPLASNKYS---AAEILKGYQVYISASPFKAMSNF 437
                     579**************************************************9.99999777666665...9********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                      aN++Il+ +e+++r+HiiDf+i +G+QWp+L+q L+ Rp+gpp+l iTg++ p++g   +e++eetg+rL++++++++vpfe+nv +ak++e++
  XP_023897042.1 438 YANRTILKVAEKAKRLHIIDFGILYGFQWPCLIQRLSVRPGGPPKLHITGIEFPQPGfrPAERVEETGRRLENYCKRFNVPFEYNV-IAKKWETI 531
                     ********************************************************9****************************9.7******* PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     +le+++++++E ++Vn++++l++++de v+++s+rd vLkl+k+++P+++++   + ++n++ Fl rf eal ++salfd+++a++pre+++r++
  XP_023897042.1 532 RLEDFKIDRDELIVVNCMFRLKNIPDEMVAMNSPRDIVLKLIKRINPEIFIHGVVNGSYNTPYFLSRFKEALFHFSALFDMFDATVPREDQHRMS 626
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +E+++l+r++++v+aceg er er et+++W++r  +aGF+++pl+ +  +++k+ ++  +++ + ++++ +++++gWk+r + ++S+W+
  XP_023897042.1 627 YEKAVLARDAMSVIACEGLERAERPETYKRWQARNLRAGFRQLPLNLELLNEVKRRVKLDYNKNFVIDKDGQWMLQGWKGRIIHALSCWK 716
                     *************************************************************999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 720 aa     Download sequence    
MDALLQGLSR SINEFEFHYS STSVMSNQNL VKGFKDNHEF ANPPFNLPTN LHPPSVSSSS  60
NSGSSLDGDS SENSSFSNSV VLNYISEILL EEDLEGKPCM LQDCVALQAA EKSFYDALGQ  120
NYPSSPMQPH PCFNQNAESP DDSFEQSSSI VSTGSYTAVK HSFEFNFNHD QSNLKSSDHI  180
PSPFDTSENS LLVPHLFSDI KSVKQIKQGL PSGSNPFFDW ESNQPVPPEP KETIGEVVPK  240
VPKNGNTLNW SRGQKNHQDR DNDYTEEGRR NKHPAVYVEE PEPTELFDKV LLCQPTADSV  300
SYTPHEVAAS QNEGNGKTQK NGRSKGSTGK TTCSRKQVNK GEIVDLSTLL TQCAQSVASN  360
DQMTTTELLK QIRQHSSPYG DGAERMAYYF ANALEARLAN QPPLYMPLAS NKYSAAEILK  420
GYQVYISASP FKAMSNFYAN RTILKVAEKA KRLHIIDFGI LYGFQWPCLI QRLSVRPGGP  480
PKLHITGIEF PQPGFRPAER VEETGRRLEN YCKRFNVPFE YNVIAKKWET IRLEDFKIDR  540
DELIVVNCMF RLKNIPDEMV AMNSPRDIVL KLIKRINPEI FIHGVVNGSY NTPYFLSRFK  600
EALFHFSALF DMFDATVPRE DQHRMSYEKA VLARDAMSVI ACEGLERAER PETYKRWQAR  660
NLRAGFRQLP LNLELLNEVK RRVKLDYNKN FVIDKDGQWM LQGWKGRIIH ALSCWKPTQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein