PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023897127.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 201aa MW: 22949.9 Da PI: 4.6306

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023897127.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	105.4	7.4e-33	8	128	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk.dkevls 94 lppGf+F Ptdeelv ++L +k++ +++ ++i+++d++ ++Pw+++ k+ ++ + +yfFs++ + +n +tk+gyW ++g d+++++ XP_023897127.1 8 LPPGFHFCPTDEELVLHFLLRKASLLPCHP-DIIPDLDLCLHDPWEFNGKALTSGSVYYFFSNKVT-------ENWITKNGYWMESGIiDEPIVT 94 79***********************999.99**********9666666777888887654.......56799*****8799 PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 + g++vg+kk Lvfy g+ap g++tdW+m+ey+l XP_023897127.1 95 SAGNKVGIKKYLVFYIGEAPGGVETDWIMQEYHL 128 ******************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
MGDGSVNLPP GFHFCPTDEE LVLHFLLRKA SLLPCHPDII PDLDLCLHDP WEFNGKALTS 60 GSVYYFFSNK VTENWITKNG YWMESGIIDE PIVTSAGNKV GIKKYLVFYI GEAPGGVETD 120 WIMQEYHLCN HDLRGALHNR RGKRKIDCSK WVLCRVYERK GNFAQWFCIS DDEDNGTELS 180 SPDEMFLSAV DDEFDDTSFP K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64530.1	4e-60	NAC family protein