PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023897322.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family Trihelix
Protein Properties Length: 288aa    MW: 34304.6 Da    PI: 8.1586
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023897322.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix79.84e-2539121186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W+ qe+++ + +r e+++++ ++k++k lWe +s km+e+gf+rs++qCk+kw+nl +ryk ++++e +     ++++p++++l+
  XP_023897322.1  39 QWSVQETKEFLMIRAELDRTFMETKRNKLLWEVISTKMKEKGFNRSAEQCKCKWKNLVTRYKGCETMEPEA---MRQQFPFYNELQ 121
                     7********************************************************************95...56689*****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MEGHHPHPHP HHLQHQHQQQ QQQHHHISVN VDTSDRFPQW SVQETKEFLM IRAELDRTFM  60
ETKRNKLLWE VISTKMKEKG FNRSAEQCKC KWKNLVTRYK GCETMEPEAM RQQFPFYNEL  120
QAIFTARMQR MLWAEAEGAA SGSKKKAAQL SSDEEEDIED SEGEIKGNTR KKIKKSSKSN  180
ITGSSTSGVG SGSGNNFNHL KEILDDFMKQ QLQIEVQWRE AFEARENERR LKEMEWRQHM  240
EALENERILM EQRWREREEQ RRMREEARAE KRDALITALL SKIRREDM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.11e-54Trihelix family protein