PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023897364.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 341aa    MW: 37457.4 Da    PI: 6.9991
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023897364.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.11e-17244277134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  XP_023897364.1 244 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 277
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MIGPNFIDEI DCGSFFDQID DLLDFPADDV EAGQANEDCN SLIPTLWQTQ PESLPGSDSV  60
FSTNNSASDL SAELSVPYED IIQLEWLSNF VEDSFSGGSL TMKKEESFIN KDSSHQQFQT  120
SSPVSVLESS SSCSGEKNVP RSPETITPGR RGRARSKRPR PATFNPRLAM QLISPTSSIT  180
ETPQPFLAPK VTSDSENFAE SRLLIKIPKQ ANAEHKKKKK IKLSVPLGPV EANQNPPSQS  240
VRKCMHCEIT KTPQWRAGPM GPKTLCNACG VRYKSGRLFP EYRPAASPTF IPSLHSNSHK  300
KVIEMRNKTG EKVVIAGKMP TMAASPELIP NANSNLALEY M
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157161KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.13e-44GATA family protein