PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023897461.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 386aa    MW: 42564.3 Da    PI: 7.0635
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023897461.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.97.4e-13323368655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L+el+P+     +k  + a++L +AveYIk+Lq
  XP_023897461.1 323 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVEYIKDLQ 368
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MESNTPDNYL PQHQPSSGLL RFRSAPSSAL SNFMETEAEV GVDSDANKAN FTEGSDSERL  60
ISRFFNYGNT NTDSIAMKRV SSNSHSQAQQ QGYSVSLPPH YPRQSLSPTA MDDDDGSYGL  120
VGSMAMDHDV QSKTGNPNII RQSSSPADLF SHLSVQNGYA MMKGIGNYSR VNSTNGDVSP  180
STERLKSQLS FSPRFPSSLG MLSQISEIGS ENLGANSPDD GKLGNGSVDA HFYGPGVPYS  240
SWNDPSHFTE NFTVMKREQD DDGKLFAANQ NGGLGNRVNM LSHHLSLPKT SSEMVAMEKF  300
LQFRDSVPCK IRAKRGCATH PRSIAERVRR TRISERMRKL QELVPNMDKQ TNTADMLDLA  360
VEYIKDLQKQ FKTLSDNKAN CKCLSM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.11e-107bHLH family protein