PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023897484.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 139aa    MW: 15905.2 Da    PI: 9.6316
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023897484.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR190.71.9e-2829117189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                     +fYneY++e+GFs+rk++ +k k+ng +t+r+fvC keg r ++k++ ++ +++raetr+gCka+l++ +++ ++k++v+++  eHnH l
  XP_023897484.1  29 DFYNEYGREAGFSIRKEYVNKCKKNGVVTSRRFVCAKEGVRGKDKRD-QNIKNPRAETRCGCKASLVIVLNRdSKKYVVSDFIAEHNHYL 117
                     6*******************************************999.99*******************99989**************88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MGIRVPSNVP MESTPFKGME FEADEIAYDF YNEYGREAGF SIRKEYVNKC KKNGVVTSRR  60
FVCAKEGVRG KDKRDQNIKN PRAETRCGCK ASLVIVLNRD SKKYVVSDFI AEHNHYLHLP  120
STVHMMPSQR KVATTHAMD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-28FAR1 family protein