PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023897610.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 213aa MW: 23627.2 Da PI: 9.8862

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023897610.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	20.5	1.3e-06	120	144	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ +Cgk F+++ +L +H+r H XP_023897610.1 120 YRCTwdNCGKGFPTSNDLSHHQRYH 144 99*********************99 PP
2	zf-C2H2	16	3.5e-05	151	173	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cgk F ++ +++rH++tH XP_023897610.1 151 HICETCGKDFLHRKDMRRHQNTH 173 68********************9 PP
3	zf-C2H2	13.9	0.00016	185	209	4	23
T..TTT..EEESSHHHHHHHHHH.T CS zf-C2H2 4 p..dCg..ksFsrksnLkrHirt.H 23 C k +srk++L rH+rt H XP_023897610.1 185 AeeMCRgkKGYSRKDHLARHMRTkH 209 5557888899*************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence
MCQCCNHERS KVAYATPSPQ GPTSAPAEWL NGMSGNINWQ LVQSTLGPGI NNWNRDVRLP 60 GEGYGAAAAS SSSNNNNDSN NYLQLPITPM AAPSPSASSV TSSARTLTKR NRDEMTQGAY 120 RCTWDNCGKG FPTSNDLSHH QRYHASGRRP HICETCGKDF LHRKDMRRHQ NTHETGSASK 180 RHFCAEEMCR GKKGYSRKDH LARHMRTKHA GGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.2	7e-08	C2H2 family protein