PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023898059.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 255aa    MW: 27699.6 Da    PI: 5.4387
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023898059.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.23.7e-1760110155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr +k+  +Wv+e r+p   +k+ r++lg+f tae+Aa+a++ a+ +l+g
  XP_023898059.1  60 PVYRGVR-RKNPCKWVCEMREP---NKKSRIWLGTFPTAEMAARAHDVAAIALRG 110
                     68****9.777*******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MDVLRHYSDP QYLMGSDICS WEFASGSDRI VNLSDEEVML ASQNPKKRDG RKKFKETRHP  60
VYRGVRRKNP CKWVCEMREP NKKSRIWLGT FPTAEMAARA HDVAAIALRG RSGCLNFADS  120
AWRLPVPASA AAKDIQRAAA EAAEAFRPAE LDTVFGDESR WKLKSAEAAA VVVAAAAVAA  180
TAAAATAAVA VAATAAAVAV EMEKEGVFFI DEEAVFGMPG LLACLAEGML LPPPHRYDGD  240
DMETDTDMSL WSYSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.15e-60ERF family protein