PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023898173.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 358aa MW: 39926 Da PI: 6.8349

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023898173.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.8	7.4e-23	92	180	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYneY+++ Fs+rk++ +k k+ g +t+r+fvC +eg r ++k++ ++ +++ra+tr gC+a+l++ +++ ++k++v+++ eHnH l XP_023898173.1 92 DFYNEYGRKSDFSIRKEYVNKCKKIGVVTSRRFVCAEEGVRGKDKRD-QNVKNPRAKTRRGCEAHLVIVLNRdSEKYVVSEFIVEHNHYL 180 6*****************************************999.999**************99999************88 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MSSGCLSLGG DHVVDGVKGG NWGKGGSGEN VNVGDGGGGD GGERVVNGDG SRVGTGGSDG 60 GIMMGIHVPS NVPMESTTFK GMEFEENEIA YDFYNEYGRK SDFSIRKEYV NKCKKIGVVT 120 SRRFVCAEEG VRGKDKRDQN VKNPRAKTRR GCEAHLVIVL NRDSEKYVVS EFIVEHNHYL 180 HLPSTMHMMP SQRNVATTHA IEIDLAHESG LRLKQPYELL SKQIGGYDNL GFTKQDHKNY 240 LRTKRQRDME HGADTRMIID YSHVGDVITF DTAYSTNRDA RPLGVFLGLN HHRESVVFGG 300 TLLYDETIEY FVWLFETFLE AMSEKKPITI FTDLDAAISA TIKVVMPKTY HALCSWHM

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MSSGCLSLGG DHVVDGVKGG NWGKGGSGEN VNVGDGGGGD GGERVVNGDG SRVGTGGSDG  60
GIMMGIHVPS NVPMESTTFK GMEFEENEIA YDFYNEYGRK SDFSIRKEYV NKCKKIGVVT  120
SRRFVCAEEG VRGKDKRDQN VKNPRAKTRR GCEAHLVIVL NRDSEKYVVS EFIVEHNHYL  180
HLPSTMHMMP SQRNVATTHA IEIDLAHESG LRLKQPYELL SKQIGGYDNL GFTKQDHKNY  240
LRTKRQRDME HGADTRMIID YSHVGDVITF DTAYSTNRDA RPLGVFLGLN HHRESVVFGG  300
TLLYDETIEY FVWLFETFLE AMSEKKPITI FTDLDAAISA TIKVVMPKTY HALCSWHM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-62	FAR1 family protein