PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023898193.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WRKY
Protein Properties Length: 185aa    MW: 21045.8 Da    PI: 7.9522
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023898193.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.56.6e-29108169159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK++ g++++rsYYrCt++   gC ++k+v+rs+edp+v+ itY+g+H++ 
  XP_023898193.1 108 LDDGYSWRKYGQKDILGANYTRSYYRCTFRhsqGCLATKQVQRSDEDPTVFAITYRGRHTCA 169
                     59**************************988889*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MELAKLLEIH PNLSSSSHET REFLAEMILG LYTKAISMLN LSSSVDETQF IGSAIRMFES  60
LADGLRSEDS DRELKNQSTE MCIDKEKQLP KWTVQVRVSS EMGLESPLDD GYSWRKYGQK  120
DILGANYTRS YYRCTFRHSQ GCLATKQVQR SDEDPTVFAI TYRGRHTCAY VPSASKTKPV  180
RRSAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.13e-47WRKY family protein