PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023898338.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 339aa MW: 37860.1 Da PI: 5.8706

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023898338.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.8	9.3e-14	221	268	1	54
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+ +h+e+ErrRR+ iN++++eL +++P + +K +iL +Av++I +L XP_023898338.1 221 RKDNHKEVERRRRETINEGINELSKIVPGC------EKNKGSILARAVQFITQL 268 6889***********************9......579***********99 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MATLQSKRKR DPQDMPNLRP APPMEVPGND FHHNHYIGGE DGVIQHTDSG IDFAAVLSAH 60 NNESGEHNQQ GQQHPHEHQL HHDHHHHQHQ LQMHQQHEQD REQDHMNEQH HGLSGEDGPS 120 ASDTAAAAMA QYHTMTVPQT TEQTFMRNVG DNTGDKQDNG STEPGVPNNG QRASFAFGGF 180 DMDTAKDNQG SPNEETSPSG APGNQSATKL QVGSDEWHKV RKDNHKEVER RRRETINEGI 240 NELSKIVPGC EKNKGSILAR AVQFITQLKE NETQNIEKWT LEKLLTEQAI AELSSSCDKL 300 KAECQRAWAE CEQWKKAAQK AGVAVDDEHK LIINTDSAE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	221	233	RKDNHKEVERRRR
2	229	234	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	4e-06	bHLH family protein